tons of spoilers, read at your own risk.
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Okay, Neo's in Matrix "limbo" - somehow his mind got "jacked in" to a train
stop outside the Matrix - the wild eyed guy in the Rev. trailer is the train
man, controlled by the Merovingian. The Oracle tells Trin and Morph this and
they threaten Merv (you're willing to die for this man?) and go and save Neo
(who in the meantime has met some new characters and had a vision of three
lines in the black dessert). Back in the real world now. Niobe gives Neo and
Trinity the logos ship after the Hammer powers it up so they can go to the
machine city (01) and try and save Zion. Meanwhile Bane (Smith) has
awakened, killed the nurse and snuck into the Logos. The Hammer heads back
to Zion to try and stop the sentinels with its emp as a last ditch effort,
and soon realize Bane has killed, escaped and must be on the Logos - but
it's too late to turn back and save Trin and Neo. Aboard the logos, Bane
blinds Neo with an electrical conduit during a fight before Neo kills him
(just after realizing he's smith inside) Trinity is beat up but okay to fly
the ship, with Neo's "second sight" - he can somehow sense the machines
life-force and "sees" them now. The Hammer tries to sneak back to Zion but
the sentinels hear them and chase them all the way home. Meanwhile, Zion is
getting the **** kicked out of it by all the sentinels. The crippled Hammer
crashes into Zion and blows it's EMP knocking out the remaining diggers and
sentinels. Meanwhile the logos is on the surface, flying over/by the fetus
fields and power plant, following three power lines to the city (like in his
vision). In Zion, they are trying to restore power while evacuating to the
deep tunnels and temple cave from Reloaded. More sentinels arrive in the
defenseless Zion and jump start a digger to continue into the bowels of Zion
and finish of the rest of it's people. Neo and Trinity have now crash landed
into the machine city after fending off bigger, meaner sentinels and an
armada of huge ships shooting shrimp bombs like from Reloaded. Trinity dies
from the crash and Neo goes on to confront a huge godlike machine that he
makes a deal with to confront smith and save the matrix (and the Ai's ?)
from being taken over (smith has altered the matrix and cloned himself into
everyone). Back in Zion the sentinels stop their attack at the last minute
and wait. The ai's jack Neo in and he fights smith, smith wins (neo pretends
to lose or fights long enough to prove he tried) and takes him over, but the
new clone freaks out, (the machine city ai has a direct link to smith now)
explodes and all the smiths explode or something... Neo dies as a result and
is hauled off by the AI's to who knows where. Everyone rejoices and the
matrix get's reloaded with a truce between man and machine.
"what about morpheus, the council and previous ones?" - morpheus navigates
the hammer for niobe (the best driver- I think ghost must be manning the
guns) and faces off with the sentinels at the opening to the zion temple
(story boards of this was spoiled a couple years ago), he may take part in a
fight to save neo, but that's about it - (he lives). i don't remember the
council being mentioned or anything about previous ones
"What about the kid" - he plays an important role durring the battle by
manning a fallen mech and shooting a chain on the zion dock door at the last
second, allowing it to open so the hammer can enter zion and use its emp. -
he lives
-no cypher, no matrix within a matrix, no phone booth scene from matrix one.
-seraph(puts up a good fight),oracle,important child (mentioned in
game)...all taken over by smith
I left out a lot of details obviously (fights,take-overs,etc.) but that's
the main jist of it.
hope you don't regret reading this!
////END SPOILER////
i like all the theories that we've tossed around before much better.....